Allows search and visualisation of a collection of uniformly processed skeletal transcriptomic datasets. Includes methods to identify datasets where genes of interest are differentially expressed and find datasets with a similar gene expression pattern to a query dataset Soul J, Hardingham TE, Boot-Handford RP, Schwartz JM (2019) <doi:10.1093/bioinformatics/bty947>.
| Version: |
0.1.1 |
| Depends: |
R (≥ 4.0) |
| Imports: |
arrow, cowplot, dplyr, DT, ggplot2, ggrepel, httr, igraph, miniUI, pbapply, plotly, rlang, shiny, stats, tidyr, utils, visNetwork |
| Suggests: |
mockery, rmarkdown, knitr, testthat (≥ 3.0.0), withr |
| Published: |
2025-05-06 |
| DOI: |
10.32614/CRAN.package.SkeletalVis |
| Author: |
Jamie Soul [aut, cre, cph] |
| Maintainer: |
Jamie Soul <jamie.soul at liverpool.ac.uk> |
| BugReports: |
https://github.com/soulj/SkeletalVis/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://github.com/soulj/SkeletalVis |
| NeedsCompilation: |
no |
| Materials: |
README, NEWS |
| CRAN checks: |
SkeletalVis results |