KRIS: Keen and Reliable Interface Subroutines for Bioinformatic
Analysis
Provides useful functions which are needed for bioinformatic analysis such as calculating linear principal components from numeric data and Single-nucleotide polymorphism (SNP) dataset, calculating fixation index (Fst) using Hudson method, creating scatter plots in 3 views, handling with PLINK binary file format, detecting rough structures and outliers using unsupervised clustering, and calculating matrix multiplication in the faster way for big data.
| Version: |
1.1.6 |
| Depends: |
R (≥ 3.5.0) |
| Imports: |
rARPACK, grDevices, graphics, stats, utils |
| Suggests: |
testthat |
| Published: |
2021-01-21 |
| DOI: |
10.32614/CRAN.package.KRIS |
| Author: |
Kridsadakorn Chaichoompu [aut, cre],
Kristel Van Steen [aut],
Fentaw Abegaz [aut],
Sissades Tongsima [aut],
Philip James Shaw [aut],
Anavaj Sakuntabhai [aut],
Luisa Pereira [aut] |
| Maintainer: |
Kridsadakorn Chaichoompu <kridsadakorn at biostatgen.org> |
| BugReports: |
https://gitlab.com/kris.ccp/kris/-/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://gitlab.com/kris.ccp/kris |
| NeedsCompilation: |
no |
| Citation: |
KRIS citation info |
| Materials: |
README, NEWS |
| In views: |
Omics |
| CRAN checks: |
KRIS results |
Documentation:
Downloads:
Reverse dependencies:
Linking:
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