Version 1.4 (development)
Major changes
- AIC and BIC goodness of fit estimation is now available via the
function
goodness.of.fit
.
- Added a graphical interface for the package via a shiny application.
Available at online or via
runGMCM()
for a local instance.
- Added
classify()
function to ease classification after
fitting a general GMCM.
- Added vignettes and documentation website via
the pkgdown
package.
Version 1.3.2 (2018-03-12)
Minor changes
- Hotfix due to new default RNG after R version 3.5.3.
Version 1.3.1 (2018-02-14)
Minor changes
- By request,
EMAlgorithm
is now exported to the user
interface with slight tweaks. Better docs and examples are also
provided.
- Expanded capability of
as.theta()
and fixed issue
incorrect default axis labels in plot.theta
.
- Fixed broken link in vignette.
- Minor improvements to documentation.
Version 1.3.0 (2018-12-05)
Major changes
- Fixed issue with optim wrappers for the likelihood
(
vector2theta
and theta2vector
) causing the
first anchored component to be scaled slightly incorrectly. Note, fitted
results will be changed compared to earlier versions (although hopefully
not much).
- Functions now return a proper
S3
object of class
theta
and print.theta()
,
summary.theta()
, and plot.theta()
functions
have been made to fit the usually expected generic functions.
- Minor improvements and corrections to documentation.
- Technical changes (with no impact on user interface):
- Updated package to use latest and packages.
- Updated Travis-CI
yaml file to ‘newly’ supported R-language.
- Expanded unit tests and added continuous integration of test
coverage with coveralls.io
utilizing the package.
Version 1.2.4 (2017-01-13 )
Minor changes
- Added vignette.
- Minor tweaks to documentation.
- Updated affiliations.
- Fixed broken links.
Version 1.2.3 (2016-03-30)
Minor changes
- Updated citation information and manuscript.
- Minor updates to documentation.
- Patch due to changes in and published manuscript.
Version 1.2.2 (2015-08-05)
Minor changes
- Patch due to changes in . No visible user changes.
Version 1.2.1 (2015-04-20)
Minor changes
- Hotfix due to failure of unit tests on sparc solaris. No visible
user changes.
Version 1.2 (2015-04-14)
Major changes
- Added the GMCM package vignette. The article is to appear in the
Journal of Statistical Software.
rtheta
has been updated substantially to allow for
finer and more explicit control if needed. Default is the old
behavior.
- Documentation has improved.
Version 1.1.1 (2014-10-07)
Minor changes
- Fixed a small testing issue on CRAN for old R versions. (Used
anyNA
on R versions older than 3.1.0).
Version 1.1 (2014-10-01)
Major changes
- This NEWS.Rd file have been added!
- The -package is now using the in-source documentation system .
- The
EStep
has been implemented in Rcpp
and
thus GMCM now features a faster pseudo EM algorithm.
- is no longer dependent on the package. now features faster
simulation of data.
- Functions
rmvnormal
and dmvnormal
are now
exported and visible to the user. These are now both implemented in and
are faster versions of rmvnorm
and dmvnorm
from .
- is now using for automated testing. The automated test suite will
further be expanded in the upcoming versions.
- Internal functions are now correctly hidden using the internal
keyword.
- The order of function arguments
verbose
and
max.ite
in fit.meta.GMCM
has been swapped to
make it consistent with fit.full.GMCM
. Apologies for any
inconveniences.
get.idr
is no longer exported and visible to the user.
Use get.IDR
to get the local (posterior class
probabilities) and adjusted irreproducibility discovery rates
(IDR).
- Added Travis
Continuous Integration for R building.
Version 1.0.1 (2014-05-30)
Minor changes
pgmm_marginal
and other functions in
src/GMCM.cpp
have been rewritten to address memory issues.
should now be more stable and faster.
Version 1.0 (2014-02-07)
Hurray!