Last updated on 2026-01-10 18:51:05 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.1 | 23.98 | 189.84 | 213.82 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.1 | 16.68 | 133.60 | 150.28 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.2.1 | 45.00 | 300.12 | 345.12 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.2.1 | 45.00 | 253.90 | 298.90 | WARN | |
| r-devel-windows-x86_64 | 0.2.1 | 28.00 | 168.00 | 196.00 | OK | |
| r-patched-linux-x86_64 | 0.2.1 | 23.05 | 180.32 | 203.37 | OK | |
| r-release-linux-x86_64 | 0.2.1 | 21.97 | 180.94 | 202.91 | OK | |
| r-release-macos-arm64 | 0.2.1 | ERROR | ||||
| r-release-macos-x86_64 | 0.2.1 | 15.00 | 436.00 | 451.00 | OK | |
| r-release-windows-x86_64 | 0.2.1 | 25.00 | 165.00 | 190.00 | OK | |
| r-oldrel-macos-arm64 | 0.2.1 | OK | ||||
| r-oldrel-macos-x86_64 | 0.2.1 | 15.00 | 166.00 | 181.00 | OK | |
| r-oldrel-windows-x86_64 | 0.2.1 | 36.00 | 221.00 | 257.00 | OK |
Version: 0.2.1
Check: replacement functions
Result: WARN
Error: there is no package called ‘Rcpp’
Call sequence:
12: doWithOneRestart(return(expr), restart)
11: withOneRestart(expr, restarts[[1L]])
10: withRestarts(stop(cond), retry_loadNamespace = function() NULL)
9: loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
8: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths()),
versionCheck = vI[[i]]), from = package)
7: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
6: asNamespace(ns)
5: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
3: asNamespace(ns)
2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
1: loadNamespace(package, lib.loc)
Execution halted
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2.1
Check: foreign function calls
Result: NOTE
Error: there is no package called ‘Rcpp’
Call sequence:
12: doWithOneRestart(return(expr), restart)
11: withOneRestart(expr, restarts[[1L]])
10: withRestarts(stop(cond), retry_loadNamespace = function() NULL)
9: loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
8: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths()),
versionCheck = vI[[i]]), from = package)
7: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
6: asNamespace(ns)
5: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
3: asNamespace(ns)
2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
1: loadNamespace(package, lib.loc)
Execution halted
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2.1
Check: R code for possible problems
Result: NOTE
Error: there is no package called ‘Rcpp’
Call sequence:
12: doWithOneRestart(return(expr), restart)
11: withOneRestart(expr, restarts[[1L]])
10: withRestarts(stop(cond), retry_loadNamespace = function() NULL)
9: loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
8: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths()),
versionCheck = vI[[i]]), from = package)
7: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
6: asNamespace(ns)
5: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
3: asNamespace(ns)
2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
1: loadNamespace(package, lib.loc)
Execution halted
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
there is no package called ‘Rcpp’
Calls: <Anonymous>
Execution halted
Error: there is no package called ‘Rcpp’
Call sequence:
12: doWithOneRestart(return(expr), restart)
11: withOneRestart(expr, restarts[[1L]])
10: withRestarts(stop(cond), retry_loadNamespace = function() NULL)
9: loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
8: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths()),
versionCheck = vI[[i]]), from = package)
7: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
6: asNamespace(ns)
5: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
3: asNamespace(ns)
2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
1: loadNamespace(package, lib.loc)
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2.1
Check: for missing documentation entries
Result: WARN
Error: package or namespace load failed for ‘rPanglaoDB’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
there is no package called ‘Rcpp’
Call sequence:
6: stop(msg, call. = FALSE, domain = NA)
5: value[[3L]](cond)
4: tryCatchOne(expr, names, parentenv, handlers[[1L]])
3: tryCatchList(expr, classes, parentenv, handlers)
2: tryCatch({
ns <- loadNamespace(package, lib.loc)
env <- attachNamespace(ns, pos = pos, deps, exclude, include.only)
}, error = function(e) {
P <- if (!is.null(cc <- conditionCall(e)))
paste(" in", deparse(cc)[1L])
else ""
msg <- gettextf("package or namespace load failed for %s%s:\n %s",
sQuote(package), P, conditionMessage(e))
if (logical.return && !quietly)
message(paste("Error:", msg), domain = NA)
else stop(msg, call. = FALSE, domain = NA)
})
1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE)
Execution halted
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2.1
Check: examples
Result: ERROR
Running examples in ‘rPanglaoDB-Ex.R’ failed
The error most likely occurred in:
> ### Name: getSampleComposition
> ### Title: Get the cell-type content for each sample from the panglaoDB
> ### database.
> ### Aliases: getSampleComposition
>
> ### ** Examples
>
> # From PanglaoDB
> # https://panglaodb.se/list_clusters_and_cell_types.html?sra=SRA689041&srs=SRS3166675
>
> SRS3166675 <- getSampleComposition(srs = 'SRS3166675')
Error in curl::curl_download(url, file, quiet = quiet, mode = mode, handle = handle) :
Timeout was reached [panglaodb.se]: Resolving timed out after 10002 milliseconds
Calls: getSampleComposition ... getSampleList -> <Anonymous> -> <Anonymous> -> raise_libcurl_error
Execution halted
Flavor: r-release-macos-arm64