CRAN Package Check Results for Maintainer ‘Paul C. Boutros <pboutros at mednet.ucla.edu>’

Last updated on 2025-02-10 17:49:45 CET.

Package NOTE OK
bedr 3 10
BoutrosLab.plotting.general 13
CancerEvolutionVisualization 13
ISOpureR 13
iSubGen 13
OmicsQC 13
OutSeekR 13
SeqKat 2 11
VennDiagram 13

Package bedr

Current CRAN status: NOTE: 3, OK: 10

Version: 1.0.7
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: bedr.plot.region.Rd: venn.diagram Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package BoutrosLab.plotting.general

Current CRAN status: OK: 13

Package CancerEvolutionVisualization

Current CRAN status: OK: 13

Package ISOpureR

Current CRAN status: NOTE: 13

Version: 1.1.3
Check: Rd files
Result: NOTE checkRd: (-1) ISOpureS1.model_optimize.kappa.kappa_deriv_loglikelihood.Rd:9: Escaped LaTeX specials: \$ checkRd: (-1) ISOpureS1.model_optimize.kappa.kappa_deriv_loglikelihood.Rd:14: Escaped LaTeX specials: \$ checkRd: (-1) ISOpureS1.model_optimize.kappa.kappa_loglikelihood.Rd:11: Escaped LaTeX specials: \$ checkRd: (-1) ISOpureS2.model_optimize.kappa.kappa_deriv_loglikelihood.Rd:11: Escaped LaTeX specials: \$ checkRd: (-1) ISOpureS2.model_optimize.kappa.kappa_loglikelihood.Rd:11: Escaped LaTeX specials: \$ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package iSubGen

Current CRAN status: OK: 13

Package OmicsQC

Current CRAN status: OK: 13

Package OutSeekR

Current CRAN status: OK: 13

Package SeqKat

Current CRAN status: NOTE: 2, OK: 11

Version: 0.0.8
Check: package dependencies
Result: NOTE Package suggested but not available for checking: 'doMC' Flavors: r-release-windows-x86_64, r-oldrel-windows-x86_64

Package VennDiagram

Current CRAN status: OK: 13