Last updated on 2025-11-26 05:51:41 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.46 | 252.28 | 264.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.71 | 226.48 | 237.19 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 17.00 | 235.00 | 252.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 28.00 | 309.00 | 337.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 237.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [89s/170s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.747, system: 0.094, elapsed: 3.653 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.915, system: 0.313, elapsed: 18.343 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.023, elapsed: 0.344 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.925, system: 0.271, elapsed: 5.769 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.203 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.579, system: 0.751, elapsed: 29.600 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.689, system: 0.068, elapsed: 2.774 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.646, system: 0.228, elapsed: 16.243 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.024, elapsed: 0.480 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.372, system: 0.360, elapsed: 9.254 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.007, elapsed: 0.333 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.692, system: 0.729, elapsed: 30.412 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.769, system: 0.080, elapsed: 3.215 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.382, system: 0.233, elapsed: 12.865 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.171, system: 0.015, elapsed: 0.186 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.452, system: 0.254, elapsed: 4.001 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.008, elapsed: 0.192 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.224, system: 0.294, elapsed: 1.122 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.796, system: 0.942, elapsed: 22.569 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.908, system: 0.134, elapsed: 2.833 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.673, system: 0.286, elapsed: 19.623 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.025, elapsed: 0.835 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.321, system: 0.333, elapsed: 14.107 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.010, elapsed: 0.559 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.675, system: 0.805, elapsed: 34.694 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.670, system: 1.661, elapsed: 74.625 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [92s/222s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.739, system: 0.097, elapsed: 4.256 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.201, system: 0.467, elapsed: 26.093 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.030, elapsed: 0.626 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.044, system: 0.333, elapsed: 8.377 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.009, elapsed: 0.398 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.069, system: 1.280, elapsed: 41.970 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.816, system: 0.100, elapsed: 6.681 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.168, system: 0.418, elapsed: 32.521 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.040, elapsed: 0.947 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.444, system: 0.479, elapsed: 11.797 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.016, elapsed: 0.943 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.484, system: 1.164, elapsed: 55.519 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.770, system: 0.084, elapsed: 5.389 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.923, system: 0.240, elapsed: 24.212 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.022, elapsed: 0.452 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.101, system: 0.349, elapsed: 9.190 seconds]
Computing values for grid cells...
... done. [user: 0.214, system: 0.027, elapsed: 0.876 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.256, system: 0.356, elapsed: 2.397 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.168, system: 1.148, elapsed: 44.754 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.944, system: 0.108, elapsed: 6.677 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.916, system: 0.210, elapsed: 21.517 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.018, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.888, system: 0.253, elapsed: 6.781 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.417 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.407, system: 0.881, elapsed: 27.339 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.218, system: 1.530, elapsed: 64.638 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64