Last updated on 2025-08-26 18:48:55 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.91 | 253.31 | 266.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.45 | 242.23 | 252.68 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 190.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.94 | 308.60 | 323.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.85 | 267.10 | 280.95 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 162.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 172.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/116s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.727, system: 0.101, elapsed: 2.566 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.189, system: 0.311, elapsed: 11.846 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.019, elapsed: 0.376 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.897, system: 0.277, elapsed: 6.295 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.007, elapsed: 0.238 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.719, system: 0.751, elapsed: 22.161 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.640, system: 0.075, elapsed: 1.950 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.241, system: 0.299, elapsed: 12.906 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.015, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.822, system: 0.212, elapsed: 5.948 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.257 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.578, system: 0.636, elapsed: 22.094 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.030, elapsed: 2.186 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.215, system: 0.242, elapsed: 13.720 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.018, elapsed: 0.337 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.946, system: 0.316, elapsed: 7.107 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.012, elapsed: 0.296 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.171, system: 0.247, elapsed: 1.136 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.825, system: 0.896, elapsed: 25.912 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.710, system: 0.099, elapsed: 2.468 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.193, system: 0.219, elapsed: 13.267 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.012, elapsed: 0.276 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.732, system: 0.181, elapsed: 5.711 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.246 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.264, system: 0.460, elapsed: 16.227 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.903, system: 1.021, elapsed: 39.288 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.601, system: 0.053, elapsed: 2.352 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.986, system: 0.144, elapsed: 12.767 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.015, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.685, system: 0.208, elapsed: 5.401 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.204 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.164, system: 0.446, elapsed: 21.745 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.603, system: 0.048, elapsed: 2.253 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.916, system: 0.095, elapsed: 12.054 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.013, elapsed: 0.233 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.653, system: 0.188, elapsed: 4.837 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.046, system: 0.378, elapsed: 20.369 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.036, elapsed: 2.217 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.003, system: 0.089, elapsed: 11.906 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.203 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.572, system: 0.215, elapsed: 5.452 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.014, elapsed: 0.256 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.050, system: 0.261, elapsed: 1.236 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.165, system: 0.663, elapsed: 22.197 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.570, system: 0.068, elapsed: 2.780 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.095, system: 0.176, elapsed: 15.087 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.377 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.572, system: 0.192, elapsed: 6.449 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.220 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.996, system: 0.438, elapsed: 15.536 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.217, system: 0.921, elapsed: 41.568 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64