Last updated on 2025-12-16 17:49:46 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.18 | 220.22 | 230.40 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 205.00 | 215.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 183.00 | 193.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 238.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.588, system: 0.041, elapsed: 2.968 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.486, system: 0.070, elapsed: 14.976 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.351 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.998, system: 0.187, elapsed: 7.011 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.297 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.002, system: 0.339, elapsed: 26.505 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.566, system: 0.036, elapsed: 2.714 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.702, system: 0.134, elapsed: 16.275 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.012, elapsed: 0.328 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.067, system: 0.184, elapsed: 7.264 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.009, elapsed: 0.312 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.282, system: 0.402, elapsed: 27.950 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.588, system: 0.038, elapsed: 2.158 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.509, system: 0.086, elapsed: 14.915 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.011, elapsed: 0.294 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.925, system: 0.170, elapsed: 6.303 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.014, elapsed: 0.277 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.230, system: 0.246, elapsed: 1.308 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.295, system: 0.599, elapsed: 26.197 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.601, system: 0.044, elapsed: 2.648 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.597, system: 0.079, elapsed: 14.449 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.013, elapsed: 0.394 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.976, system: 0.185, elapsed: 6.292 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.004, elapsed: 0.238 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.896, system: 0.492, elapsed: 18.289 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.129, system: 0.839, elapsed: 43.451 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.553, system: 0.039, elapsed: 2.050 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.418, system: 0.053, elapsed: 14.350 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.016, elapsed: 0.328 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.776, system: 0.187, elapsed: 6.296 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.007, elapsed: 0.306 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.693, system: 0.331, elapsed: 24.238 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.031, elapsed: 2.488 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.602, system: 0.052, elapsed: 14.511 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.013, elapsed: 0.299 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.881, system: 0.172, elapsed: 5.894 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.997, system: 0.302, elapsed: 24.385 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.499, system: 0.028, elapsed: 2.274 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.735, system: 0.150, elapsed: 14.948 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.854, system: 0.226, elapsed: 5.283 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.010, elapsed: 0.282 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.124, system: 0.276, elapsed: 1.049 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.252, system: 0.744, elapsed: 25.102 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.577, system: 0.044, elapsed: 2.662 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.692, system: 0.121, elapsed: 15.380 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.014, elapsed: 0.330 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.820, system: 0.177, elapsed: 6.205 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.277 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.700, system: 0.488, elapsed: 16.576 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.803, system: 0.876, elapsed: 42.488 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64