Last updated on 2025-09-16 18:49:46 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.09 | 263.20 | 276.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.80 | 255.61 | 266.41 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 309.63 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.39 | 239.08 | 253.47 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 155.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 181.00 | 200.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 177.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/100s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.473, system: 0.047, elapsed: 2.033 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.144, system: 0.176, elapsed: 14.012 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.016, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.722, system: 0.232, elapsed: 5.325 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.006, elapsed: 0.264 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.219, system: 0.502, elapsed: 22.661 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.059, elapsed: 2.320 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.018, system: 0.198, elapsed: 12.506 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.013, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.755, system: 0.212, elapsed: 5.547 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.166 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.187, system: 0.508, elapsed: 21.535 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.587, system: 0.054, elapsed: 1.990 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.132, system: 0.090, elapsed: 8.934 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.150, system: 0.008, elapsed: 0.158 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.215, system: 0.196, elapsed: 3.831 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.006, elapsed: 0.185 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.154, system: 0.227, elapsed: 1.005 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.958, system: 0.604, elapsed: 16.812 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.591, system: 0.079, elapsed: 1.963 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.990, system: 0.233, elapsed: 10.470 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.019, elapsed: 0.229 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.821, system: 0.284, elapsed: 4.675 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.005, elapsed: 0.169 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.135, system: 0.603, elapsed: 13.600 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.520, system: 1.266, elapsed: 31.840 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/117s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.546, system: 0.055, elapsed: 1.755 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.154, system: 0.259, elapsed: 14.259 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.018, elapsed: 0.319 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.722, system: 0.282, elapsed: 5.391 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.008, elapsed: 0.197 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.303, system: 0.647, elapsed: 22.586 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.728, system: 0.080, elapsed: 2.302 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.137, system: 0.273, elapsed: 12.487 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.015, elapsed: 0.400 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.706, system: 0.250, elapsed: 4.822 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.007, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.448, system: 0.658, elapsed: 21.009 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.698, system: 0.073, elapsed: 2.034 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.842, system: 0.171, elapsed: 9.917 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.177, system: 0.013, elapsed: 0.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.520, system: 0.238, elapsed: 4.973 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.019, elapsed: 0.398 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.108, system: 0.261, elapsed: 2.112 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.129, system: 0.817, elapsed: 20.473 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.599, system: 0.060, elapsed: 4.679 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.998, system: 0.127, elapsed: 14.263 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.010, elapsed: 0.222 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.522, system: 0.162, elapsed: 6.169 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.005, elapsed: 0.311 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.047, system: 0.445, elapsed: 18.317 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.155, system: 0.842, elapsed: 45.409 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64