Last updated on 2026-04-23 19:52:19 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.18 | 301.85 | 317.03 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.43 | 267.11 | 278.54 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 300.78 | 323.78 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 341.93 | 373.93 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 195.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 345.71 | 360.26 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 334.90 | 349.10 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 540.00 | 554.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 430.00 | 441.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 243.00 | 269.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [115s/457s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.687, system: 0.082, elapsed: 4.655 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.120, system: 0.348, elapsed: 20.705 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.237, system: 0.040, elapsed: 0.526 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.695, system: 1.044, elapsed: 49.666 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.009, elapsed: 0.297 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.620, system: 1.925, elapsed: 77.902 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.584, system: 0.053, elapsed: 3.094 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.008, system: 0.326, elapsed: 17.787 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.028, elapsed: 1.117 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.906, system: 1.092, elapsed: 32.928 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.007, elapsed: 0.179 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.616, system: 1.786, elapsed: 57.038 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.729, system: 0.068, elapsed: 2.014 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.255, system: 0.394, elapsed: 21.902 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.234, system: 0.029, elapsed: 1.735 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.279, system: 2.478, elapsed: 144.868 seconds]
Computing values for grid cells...
... done. [user: 0.214, system: 0.025, elapsed: 0.542 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.470, system: 0.450, elapsed: 3.109 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.190, system: 3.912, elapsed: 176.822 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.737, system: 0.094, elapsed: 4.413 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.204, system: 0.307, elapsed: 22.477 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.228, system: 0.028, elapsed: 0.949 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.595, system: 1.286, elapsed: 67.496 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.011, elapsed: 0.306 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.249, system: 0.981, elapsed: 33.639 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.035, system: 3.038, elapsed: 131.607 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [114s/360s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.569, system: 0.067, elapsed: 1.902 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.110, system: 0.240, elapsed: 15.711 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.228, system: 0.026, elapsed: 0.921 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.567, system: 0.983, elapsed: 28.027 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.008, elapsed: 0.230 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.300, system: 1.365, elapsed: 47.897 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.779, system: 0.084, elapsed: 2.858 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.955, system: 0.181, elapsed: 13.913 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.017, elapsed: 0.787 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.728, system: 0.970, elapsed: 13.024 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.007, elapsed: 0.237 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.615, system: 1.307, elapsed: 31.585 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.029, system: 0.073, elapsed: 2.163 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.002, system: 0.224, elapsed: 15.583 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.266, system: 0.027, elapsed: 0.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.470, system: 1.009, elapsed: 15.377 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.005, elapsed: 0.193 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 4 3
... computing probabilities from permuted values ...
... done. [user: 1.242, system: 0.316, elapsed: 1.028 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.160, system: 1.728, elapsed: 35.621 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.982, system: 0.097, elapsed: 2.981 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.023, system: 0.165, elapsed: 13.622 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.019, elapsed: 0.909 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.644, system: 2.823, elapsed: 160.548 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.011, elapsed: 0.445 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.327, system: 1.195, elapsed: 53.713 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.169, system: 4.448, elapsed: 233.780 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64