Last updated on 2025-02-10 17:49:33 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| gimap | 4 | 7 | |
| metricminer | 3 | 10 | |
| ottrpal | 3 | 10 |
Current CRAN status: ERROR: 4, OK: 7
Version: 1.0.1
Check: examples
Result: ERROR
Running examples in ‘gimap-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: setup_data
> ### Title: Making a new gimap dataset
> ### Aliases: setup_data
>
> ### ** Examples
>
>
> counts <- get_example_data("count") %>%
+ dplyr::select(c(
+ "Day00_RepA", "Day05_RepA", "Day22_RepA", "Day22_RepB",
+ "Day22_RepC"
+ )) %>%
+ as.matrix()
Downloading: 1.4 kB
Downloading: 1.4 kB
Downloading: 1.4 kB
Downloading: 1.4 kB Downloading: PP_pgPEN_HeLa_counts.txt
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Warning in file(con, "w") :
cannot open file '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gimap/extdata/PP_pgPEN_HeLa_counts.txt': Read-only file system
Error in file(con, "w") : cannot open the connection
Calls: %>% ... get_example_data -> get_figshare -> writeLines -> file
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
run_qc 5.904 0.205 9.128
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.1
Check: examples
Result: ERROR
Running examples in ‘gimap-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: setup_data
> ### Title: Making a new gimap dataset
> ### Aliases: setup_data
>
> ### ** Examples
>
>
> counts <- get_example_data("count") %>%
+ dplyr::select(c(
+ "Day00_RepA", "Day05_RepA", "Day22_RepA", "Day22_RepB",
+ "Day22_RepC"
+ )) %>%
+ as.matrix()
Downloading: 1.4 kB
Downloading: 1.4 kB
Downloading: 1.4 kB
Downloading: 1.4 kB Downloading: PP_pgPEN_HeLa_counts.txt
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Warning in file(con, "w") :
cannot open file '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/gimap/extdata/PP_pgPEN_HeLa_counts.txt': Read-only file system
Error in file(con, "w") : cannot open the connection
Calls: %>% ... get_example_data -> get_figshare -> writeLines -> file
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
run_qc 4.075 0.282 6.508
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.1
Check: examples
Result: ERROR
Running examples in ‘gimap-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: setup_data
> ### Title: Making a new gimap dataset
> ### Aliases: setup_data
>
> ### ** Examples
>
>
> counts <- get_example_data("count") %>%
+ dplyr::select(c(
+ "Day00_RepA", "Day05_RepA", "Day22_RepA", "Day22_RepB",
+ "Day22_RepC"
+ )) %>%
+ as.matrix()
Downloading: 1.4 kB
Downloading: 1.4 kB
Downloading: 1.4 kB
Downloading: 1.4 kB Downloading: PP_pgPEN_HeLa_counts.txt
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Warning in file(con, "w") :
cannot open file '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gimap/extdata/PP_pgPEN_HeLa_counts.txt': Read-only file system
Error in file(con, "w") : cannot open the connection
Calls: %>% ... get_example_data -> get_figshare -> writeLines -> file
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.1
Check: examples
Result: ERROR
Running examples in ‘gimap-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: setup_data
> ### Title: Making a new gimap dataset
> ### Aliases: setup_data
>
> ### ** Examples
>
>
> counts <- get_example_data("count") %>%
+ dplyr::select(c(
+ "Day00_RepA", "Day05_RepA", "Day22_RepA", "Day22_RepB",
+ "Day22_RepC"
+ )) %>%
+ as.matrix()
Downloading: 1.4 kB
Downloading: 1.4 kB
Downloading: 1.4 kB
Downloading: 1.4 kB Downloading: PP_pgPEN_HeLa_counts.txt
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Warning in file(con, "w") :
cannot open file '/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/gimap/extdata/PP_pgPEN_HeLa_counts.txt': Read-only file system
Error in file(con, "w") : cannot open the connection
Calls: %>% ... get_example_data -> get_figshare -> writeLines -> file
Execution halted
Flavor: r-release-linux-x86_64
Current CRAN status: NOTE: 3, OK: 10
Version: 0.5.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
authorize.Rd: oauth2.0_token
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Current CRAN status: NOTE: 3, OK: 10
Version: 1.2.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
authorize.Rd: oauth2.0_token
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64