Last updated on 2026-02-20 18:53:06 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.1 | 6.75 | 220.09 | 226.84 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.1 | 3.68 | 155.11 | 158.79 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.1 | 12.00 | 371.94 | 383.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.0.1 | 12.00 | 361.87 | 373.87 | OK | |
| r-devel-macos-arm64 | 2.0.1 | 2.00 | 31.00 | 33.00 | ERROR | |
| r-devel-windows-x86_64 | 2.0.1 | 9.00 | 176.00 | 185.00 | OK | |
| r-patched-linux-x86_64 | 2.0.1 | OK | ||||
| r-release-linux-x86_64 | 2.0.1 | 6.70 | 209.72 | 216.42 | OK | |
| r-release-macos-arm64 | 2.0.1 | 1.00 | 29.00 | 30.00 | ERROR | |
| r-release-macos-x86_64 | 2.0.1 | 5.00 | 278.00 | 283.00 | OK | |
| r-release-windows-x86_64 | 2.0.1 | 9.00 | 172.00 | 181.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.1 | 2.00 | 52.00 | 54.00 | OK | |
| r-oldrel-macos-x86_64 | 2.0.1 | 5.00 | 322.00 | 327.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.1 | 12.00 | 234.00 | 246.00 | OK |
Version: 2.0.1
Check: examples
Result: ERROR
Running examples in ‘FCO-Ex.R’ failed
The error most likely occurred in:
> ### Name: flex_co
> ### Title: Obtain flexible cutoffs for one or two models
> ### Aliases: flex_co
>
> ### ** Examples
>
> #Note: Demonstration only! Please use higher numbers of replications for your applications (>= 500).
> #A single model to obtain fit indices for
> mod <- "
+ F1 =~ Q5 + Q7 + Q8
+ F2 =~ Q2 + Q4
+ F3 =~ Q10 + Q11 + Q12 + Q13 + Q18 + Q19 + Q20 + Q21 + Q22
+ F4 =~ Q1 + Q17
+ F5 =~ Q6 + Q14 + Q15 + Q16
+ "
> fits.single <- gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
Warning in pop_mod(mod = mod1, x = x, type = type, standardized = standardized) :
All loadings are < 1. Consider revision of standardized.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")doTryCatch(return(expr), name, parentenv, handler)
9: } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))tryCatchList(expr, classes, parentenv, handlers)
11: })
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]
14: FUN(X[[i]], ...) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
15: lapply(X = S, FUN = FUN, ...) type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n")
16: doTryCatch(return(expr), name, parentenv, handler) .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
18: tryCatchList(expr, classes, parentenv, handlers)13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
19: tryCatch(expr, error = function(e) {
14: FUN(X[[i]], ...) call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]]) type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")
18: tryCatchList(expr, classes, parentenv, handlers) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n")
19: tryCatch(expr, error = function(e) { .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ")sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")FUN(X[[i]], ...)
23: if (w > LONG) prefix <- paste0(prefix, "\n ") }lapply(seq_len(cores), inner.do)
24: else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())}, mc.cores = cores)
25: } invisible(structure(msg, class = "try-error", condition = e))})gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
An irrecoverable exception occurred. R is aborting now ...
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
An irrecoverable exception occurred. R is aborting now ...
Warning in parallel::mclapply(1:rep, function(r) { :
scheduled cores 1, 2 did not deliver results, all values of the jobs will be affected
> flex_co(fits = fits.single, index = c("CFI", "SRMR"))
Warning in flex_co(fits = fits.single, index = c("CFI", "SRMR")) :
The number of replications is lower than the recommended minimum of 500. Consider with care.
Error in fits.nna[[1]] : subscript out of bounds
Calls: flex_co -> %in%
Execution halted
Flavor: r-devel-macos-arm64
Version: 2.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(FCO)
>
> test_check("FCO")
This is lavaan 0.6-21
lavaan is FREE software! Please report any bugs.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one,
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers) sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]
12: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : "try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...) msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: 19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e)) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L)})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e)) skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)eval(code, test_env)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
} else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-flex_co-29.R
Saving _problems/test-flex_co-39.R
Saving _problems/test-flex_co-52.R
Saving _problems/test-flex_co-75.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15:
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, 21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: 26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) {
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the result fco of gen_fit a list of length rep?", skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_type(out$fco, "list") expect_equal(length(out$fco), 10) })
38: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
35: if (snapshot_skipped) {withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE36: test_code(code, parent.frame())
37: test_that("Is the result fco of gen_fit a list of length rep?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_type(out$fco, "list") expect_equal(length(out$fco), 10) })
38: eval(code, test_env)
39: eval(code, test_env)
invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46:
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n")withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call) reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is mod1 a model?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_s3_class(lavaanify(out$mod1), "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is mod1 a model?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_s3_class(lavaanify(out$mod1), "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10:
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)tryCatchList(expr, classes, parentenv, handlers)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { 4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: 10: tryCatchList(expr, classes, parentenv, handlers)generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ")
18: tryCatchList(expr, classes, parentenv, handlers) LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], } invisible(structure(msg, class = "try-error", condition = e))})
type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: 14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: 18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75Lgen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) }doTryCatch(return(expr), name, parentenv, handler)
30: invisible(structure(msg, class = "try-error", condition = e))})
tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: 20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
skip("On CRAN") }32: tryCatch(withCallingHandlers({ else if (!new_expectations && skip_on_empty) { skip_empty() eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
}37: }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, test_that("Is x a data.frame?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_s3_class(out$x, "data.frame")})
38: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is x a data.frame?", {eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_s3_class(out$x, "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")41: doTryCatch(return(expr), name, parentenv, handler)
}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
} else if (!new_expectations && skip_on_empty) { skip_empty()43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, withOneRestart(expr, restarts[[1L]])
47: error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectationsdoWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call) load_package = load_package, parallel = parallel, shuffle = shuffle)
59:
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: 15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, 23: lapply(seq_len(cores), inner.do)
ov.names.x = ov.names.x, lavpartable = lavpartable)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores) 4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) {
25: cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28:
14: FUN(X[[i]], ...)
15: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: prefix <- paste0(prefix, "\n ") }doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
22: FUN(X[[i]], ...)
23: 34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectationslapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf) if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }
37: test_that("Is standard type NM?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_equal(out$type, "NM") else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {})
38: eval(code, test_env)
39: skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)eval(code, test_env)
29: doTryCatch(return(expr), name, parentenv, handler)
30: 40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }tryCatch(withCallingHandlers({ eval(code, test_env) else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }36: test_code(code, parent.frame())
}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
37: test_that("Is standard type NM?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_equal(out$type, "NM")})45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
47:
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: 50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, 55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
*** caught segfault ***
address 0x110, cause 'invalid permissions'
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "HB")
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type HB taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "HB") expect_equal(out$type, "HB")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "HB")
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type HB taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "HB") expect_equal(out$type, "HB")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
*** caught segfault ***
19: tryCatch(expr, error = function(e) {address 0x110, cause 'invalid permissions'
call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "EM")
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type EM taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "EM") expect_equal(out$type, "EM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "EM")
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type EM taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "EM") expect_equal(out$type, "EM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the result fco of gen_fit a list of matrices with two rows?", { out <- gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) expect_type(out$fco, "list") expect_equal(nrow(do.call("rbind", out$fco)), 20) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the result fco of gen_fit a list of matrices with two rows?", { out <- gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) expect_type(out$fco, "list") expect_equal(nrow(do.call("rbind", out$fco)), 20) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-gen_fit-99.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is a second model accepted?", { out <- gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) expect_s3_class(lavaanify(out$mod2), "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is a second model accepted?", { out <- gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) expect_s3_class(lavaanify(out$mod2), "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type EM used when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$type, "EM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type EM used when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$type, "EM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is constraining used when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$merge.mod, FALSE)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is constraining used when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$merge.mod, FALSE)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1,
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)18:
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
msg <- paste0(prefix, conditionMessage(e), "\n")14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { else prefix <- "Error : " snapshot_skipped <<- TRUE msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { if (snapshot_skipped) { })
36: test_code(code, parent.frame())
37: test_that("Is dv.cutoff set to .9 when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$dv.cutoff, 0.9)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
else if (!new_expectations && skip_on_empty) {35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {test_that("Is dv.cutoff set to .9 when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$dv.cutoff, 0.9) skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {
52: skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the first and second factor merged when DV is TRUE, merge.mod is TRUE and dv.factors is missing?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE) expect_equal(grepl("F2 =~ ", out$mod2), FALSE) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the first and second factor merged when DV is TRUE, merge.mod is TRUE and dv.factors is missing?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE) expect_equal(grepl("F2 =~ ", out$mod2), FALSE) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE, dv.factors = c("F2", "F3"))
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is merging used when DV is TRUE, merge.mod is TRUE and dv.factors is provided?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE, dv.factors = c("F2", "F3")) expect_equal(out$merge.mod, TRUE) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE, dv.factors = c("F2", "F3"))
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is merging used when DV is TRUE, merge.mod is TRUE and dv.factors is provided?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE, dv.factors = c("F2", "F3")) expect_equal(out$merge.mod, TRUE) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.cutoff = 0.85)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is dv.cutoff set to .85 taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.cutoff = 0.85) expect_equal(grepl("F2~~0.85*F1", out$mod2), FALSE)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.cutoff = 0.85)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is dv.cutoff set to .85 taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.cutoff = 0.85) expect_equal(grepl("F2~~0.85*F1", out$mod2), FALSE)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch)))
Traceback:
call <- sys.call(-4L) 1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: 13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) 14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]]) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e)
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20:
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
26: eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
27: withCallingHandlers(expr, condition = function(cnd) { if (!is.null(matched) || !matches(cnd)) { return() } if (can_entrace(cnd)) { cnd <- cnd_entrace(cnd) } matched <<- cnd if (inherits(cnd, "message") || inherits(cnd, "warning")) { cnd_muffle(cnd) } else if (inherits(cnd, "error") || inherits(cnd, "skip")) { return_from(tl, cnd) }})
28: .capture(act$val <- eval_bare(quo_get_expr(.quo), quo_get_env(.quo)), ...)try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
29: quasi_capture(enquo(object), label, capture_matching_condition, matches = matcher)
30: expect_condition_matching_("warning", { { object }}, regexp = regexp, class = class, ..., inherit = inherit, info = info, label = label)
31: expect_warning(gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE))
32: eval(code, test_env)
33: eval(code, test_env)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
26: eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
27: withCallingHandlers(expr, condition = function(cnd) { if (!is.null(matched) || !matches(cnd)) { return() } if (can_entrace(cnd)) { cnd <- cnd_entrace(cnd) } matched <<- cnd if (inherits(cnd, "message") || inherits(cnd, "warning")) { cnd_muffle(cnd) }34: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() else if (inherits(cnd, "error") || inherits(cnd, "skip")) { return_from(tl, cnd) }})
28: .capture(act$val <- eval_bare(quo_get_expr(.quo), quo_get_env(.quo)), ...)
29: quasi_capture(enquo(object), label, capture_matching_condition, matches = matcher)
30: expect_condition_matching_("warning", { { object }}, regexp = regexp, class = class, ..., inherit = inherit, info = info, label = label)
31: expect_warning(gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE))
32: eval(code, test_env)
33: eval(code, test_env)
34: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") } else if (!new_expectations && skip_on_empty) {}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
35: skip_empty()doTryCatch(return(expr), name, parentenv, handler)
36: tryCatchOne(expr, names, parentenv, handlers[[1L]])
37: tryCatchList(expr, classes, parentenv, handlers)
38: }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUEtryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
35: doTryCatch(return(expr), name, parentenv, handler)
36: tryCatchOne(expr, names, parentenv, handlers[[1L]])
37: tryCatchList(expr, classes, parentenv, handlers)
}}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE38: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
39: invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
39: doWithOneRestart(return(expr), restart)
40: withOneRestart(expr, restarts[[1L]])
41: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }doWithOneRestart(return(expr), restart)
40: withOneRestart(expr, restarts[[1L]])
41: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
42: test_code(code, parent.frame())
43: }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUEtest_that("Is a warning produced when standardized is switched off?", { expect_warning(gen_fit(mod1 = mod, x = bb1992, rep = 10, invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
standardized = FALSE)) })
44: eval(code, test_env)
45: eval(code, test_env)
46: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {42: test_code(code, parent.frame())
43: test_that("Is a warning produced when standardized is switched off?", { expect_warning(gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)) })
44: eval(code, test_env)
45: eval(code, test_env) skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
47: doTryCatch(return(expr), name, parentenv, handler)
48:
46: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
47: doTryCatch(return(expr), name, parentenv, handler)
48: tryCatchOne(expr, names, parentenv, handlers[[1L]])
49: tryCatchList(expr, classes, parentenv, handlers)
50: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
51: doWithOneRestart(return(expr), restart)
52: withOneRestart(expr, restarts[[1L]])
53: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env)tryCatchOne(expr, names, parentenv, handlers[[1L]])
49: tryCatchList(expr, classes, parentenv, handlers)
50: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
51: doWithOneRestart(return(expr), restart)
52: withOneRestart(expr, restarts[[1L]])
})
54: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
55: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
56: FUN(X[[i]], ...)
57: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)53: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")
58: doTryCatch(return(expr), name, parentenv, handler)
59: tryCatchOne(expr, names, parentenv, handlers[[1L]])
60: tryCatchList(expr, classes, parentenv, handlers)
61: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
62: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
63: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
64: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
65: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
66: test_check("FCO") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
An irrecoverable exception occurred. R is aborting now ...
54: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
55: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
56: FUN(X[[i]], ...)
57: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
58: doTryCatch(return(expr), name, parentenv, handler)
59: tryCatchOne(expr, names, parentenv, handlers[[1L]])
60: tryCatchList(expr, classes, parentenv, handlers)
61: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
62: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
63: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
64: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
65: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
66: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: 6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {
8: doTryCatch(return(expr), name, parentenv, handler) if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]
9: tryCatchOne(expr, names, parentenv, handlers[[1L]]) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
10: tryCatchList(expr, classes, parentenv, handlers) type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")
11: tryCatch(expr, error = function(e) { } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")14: FUN(X[[i]], ...)
if (w > LONG) prefix <- paste0(prefix, "\n ") }15: lapply(X = S, FUN = FUN, ...)
else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]]) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
18: tryCatchList(expr, classes, parentenv, handlers)
19: 12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...) if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")
15: lapply(X = S, FUN = FUN, ...) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n")
16: doTryCatch(return(expr), name, parentenv, handler) .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]]) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))
18: tryCatchList(expr, classes, parentenv, handlers)})
20:
19: tryCatch(expr, error = function(e) {try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf) call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")}, mc.cores = cores)
25: if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())eval(code, test_env)
27: } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)eval(code, test_env)
28:
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
22: FUN(X[[i]], ...) if (snapshot_skipped) { skip("On CRAN") }
23: lapply(seq_len(cores), inner.do) else if (!new_expectations && skip_on_empty) { skip_empty() }
24: parallel::mclapply(1:rep, function(r) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores) invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
26: eval(code, test_env)
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({
27: eval(code, test_env) eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {
28: withCallingHandlers({ skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
skip("On CRAN") } else if (!new_expectations && skip_on_empty) {35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame()) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message,
37: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
38: error = handle_error, interrupt = handle_interrupt)
29: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUEwithRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE
33: doWithOneRestart(return(expr), restart) invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { end_test = function() { }) skip("On CRAN") } else if (!new_expectations && skip_on_empty) {
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: })
36: test_code(code, parent.frame())
37: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)tryCatchList(expr, classes, parentenv, handlers)
55: expect_equal(out1$seed, out2$seed)})
tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3:
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] 4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")eval(sc, parent.frame())
6: eval(sc, parent.frame()) if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) invisible(structure(msg, class = "try-error", condition = e)) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod,
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...) sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env)22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: new_expectations <- the$test_expectations > starting_expectationsgen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()26: }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: 29: doTryCatch(return(expr), name, parentenv, handler)
doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {
36: test_code(code, parent.frame())
37: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
38: eval(code, test_env)
39: eval(code, test_env) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") error = handle_error, interrupt = handle_interrupt)}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env)44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
}}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
}}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% 54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: 56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: FUN(X[[i]], ...)
test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
*** caught segfault ***
address 0x110, cause 'invalid permissions'
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
})
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: 10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf) env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) 48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend-34.R
Saving _problems/test-recommend-56.R
Saving _problems/test-recommend-69.R
Saving _problems/test-recommend-94.R
Saving _problems/test-recommend-112.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), dv.cutoff = 0.9)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), dv.cutoff = 0.9)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend_dv-43.R
Saving _problems/test-recommend_dv-51.R
Saving _problems/test-recommend_dv-59.R
Saving _problems/test-recommend_dv-68.R
[ FAIL 14 | WARN 25 | SKIP 0 | PASS 55 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-flex_co.R:24:13'): Is the function warning because of low replications? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-flex_co.R:24:13
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─FCO::flex_co(...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-flex_co.R:34:13'): Is the function accepting multiple indices? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-flex_co.R:34:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::flex_co(...)
4. └─index %in% names(fits.nna[[1]])
── Error ('test-flex_co.R:47:13'): Is the function reversing quantile definition based on gof? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-flex_co.R:47:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::flex_co(...)
4. └─index %in% names(fits.nna[[1]])
── Error ('test-flex_co.R:70:13'): Is the function returning values for two models? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-flex_co.R:70:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::flex_co(...)
4. └─index %in% names(fits.nna[[1]])
── Failure ('test-gen_fit.R:99:13'): Is the result fco of gen_fit a list of matrices with two rows? ──
Expected `nrow(do.call("rbind", out$fco))` to equal 20.
Differences:
`actual` is NULL
`expected` is a double vector (20)
── Error ('test-recommend.R:29:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #1 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:29:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:51:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #3 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:51:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:62:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #4 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:62:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:86:13'): Is the result rounded properly? ───────────
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:86:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:104:13'): Are the indices properly used when override is TRUE? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:104:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend_dv.R:40:13'): Are multiple fit indices supported? ────
Error in `recommend_dv(fits = fits.dv.merge, index = c("CFI", "SRMR", "GFI"))`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend_dv.R:40:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(...)
── Error ('test-recommend_dv.R:49:13'): Is the proper dv technique used? merging? ──
Error in `recommend_dv(fits = fits.dv.merge, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.merge, )) at test-recommend_dv.R:49:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.merge, )
── Error ('test-recommend_dv.R:57:13'): Is the proper dv technique used? constraining? ──
Error in `recommend_dv(fits = fits.dv.con, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, )) at test-recommend_dv.R:57:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, )
── Error ('test-recommend_dv.R:65:13'): Is the result rounded properly? ────────
Error in `recommend_dv(fits = fits.dv.con, digits = 5)`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, digits = 5)) at test-recommend_dv.R:65:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, digits = 5)
[ FAIL 14 | WARN 25 | SKIP 0 | PASS 55 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-macos-arm64
Version: 2.0.1
Check: examples
Result: ERROR
Running examples in ‘FCO-Ex.R’ failed
The error most likely occurred in:
> ### Name: flex_co
> ### Title: Obtain flexible cutoffs for one or two models
> ### Aliases: flex_co
>
> ### ** Examples
>
> #Note: Demonstration only! Please use higher numbers of replications for your applications (>= 500).
> #A single model to obtain fit indices for
> mod <- "
+ F1 =~ Q5 + Q7 + Q8
+ F2 =~ Q2 + Q4
+ F3 =~ Q10 + Q11 + Q12 + Q13 + Q18 + Q19 + Q20 + Q21 + Q22
+ F4 =~ Q1 + Q17
+ F5 =~ Q6 + Q14 + Q15 + Q16
+ "
> fits.single <- gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
Warning in pop_mod(mod = mod1, x = x, type = type, standardized = standardized) :
All loadings are < 1. Consider revision of standardized.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch)))
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
An irrecoverable exception occurred. R is aborting now ...
unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
An irrecoverable exception occurred. R is aborting now ...
Warning in parallel::mclapply(1:rep, function(r) { :
scheduled cores 1, 2 did not deliver results, all values of the jobs will be affected
> flex_co(fits = fits.single, index = c("CFI", "SRMR"))
Warning in flex_co(fits = fits.single, index = c("CFI", "SRMR")) :
The number of replications is lower than the recommended minimum of 500. Consider with care.
Error in fits.nna[[1]] : subscript out of bounds
Calls: flex_co -> %in%
Execution halted
Flavor: r-release-macos-arm64
Version: 2.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(FCO)
>
> test_check("FCO")
This is lavaan 0.6-21
lavaan is FREE software! Please report any bugs.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) {
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV) cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25:
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
10: tryCatchList(expr, classes, parentenv, handlers)
11: if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt) if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : "
29: doTryCatch(return(expr), name, parentenv, handler)
30: msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L)
34: withOneRestart(expr, restarts[[1L]])
35: dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39:
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)eval(code, test_env)
27: eval(code, test_env)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, 28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-flex_co-29.R
Saving _problems/test-flex_co-39.R
Saving _problems/test-flex_co-52.R
Saving _problems/test-flex_co-75.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) 16: doTryCatch(return(expr), name, parentenv, handler)
17: call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: 21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {
27: eval(code, test_env)
28: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()test_code(code, parent.frame())
37: test_that("Is the result fco of gen_fit a list of length rep?", { }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_type(out$fco, "list") expect_equal(length(out$fco), 10) })
38: eval(code, test_env)
39: eval(code, test_env)}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the result fco of gen_fit a list of length rep?", { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_type(out$fco, "list") expect_equal(length(out$fco), 10) })
38: 49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: eval(code, test_env)
39: eval(code, test_env)
lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n")}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: 44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: 46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env)test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is mod1 a model?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_s3_class(lavaanify(out$mod1), "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is mod1 a model?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_s3_class(lavaanify(out$mod1), "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21:
*** caught segfault ***
address 0x110, cause 'invalid permissions'
sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is x a data.frame?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_s3_class(out$x, "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is x a data.frame?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_s3_class(out$x, "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35:
*** caught segfault ***
address 0x110, cause 'invalid permissions'
withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is standard type NM?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_equal(out$type, "NM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is standard type NM?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10) expect_equal(out$type, "NM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "HB")
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type HB taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "HB") expect_equal(out$type, "HB")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "HB")
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type HB taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "HB") expect_equal(out$type, "HB")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "EM")
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type EM taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "EM") expect_equal(out$type, "EM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "EM")
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type EM taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, type = "EM") expect_equal(out$type, "EM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the result fco of gen_fit a list of matrices with two rows?", { out <- gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) expect_type(out$fco, "list") expect_equal(nrow(do.call("rbind", out$fco)), 20) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the result fco of gen_fit a list of matrices with two rows?", { out <- gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) expect_type(out$fco, "list") expect_equal(nrow(do.call("rbind", out$fco)), 20) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-gen_fit-99.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is a second model accepted?", { out <- gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) expect_s3_class(lavaanify(out$mod2), "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) {
*** caught segfault ***
address 0x110, cause 'invalid permissions'
if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is a second model accepted?", { out <- gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) expect_s3_class(lavaanify(out$mod2), "data.frame")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type EM used when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$type, "EM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is type EM used when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$type, "EM")})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats,
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa") unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions,
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE) WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { 5: eval(sc, parent.frame())
6: eval(sc, parent.frame()) call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " 8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) {
14: FUN(X[[i]], ...)
15: cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14:
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]]) sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)
18: tryCatchList(expr, classes, parentenv, handlers)
19: .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L)20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG)
22: FUN(X[[i]], ...)
23: prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21:
27: eval(code, test_env)
28: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
}}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: 25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]]) end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is constraining used when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$merge.mod, FALSE)})
38: eval(code, test_env)
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is constraining used when DV is TRUE?", { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$merge.mod, FALSE)})
38: eval(code, test_env)
39: eval(code, test_env)
invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: 40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {
43: tryCatchList(expr, classes, parentenv, handlers)
44: skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { }) if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() cat(conditionMessage(cnd), "\n") NULL})
56: }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: 49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
An irrecoverable exception occurred. R is aborting now ...
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is dv.cutoff set to .9 when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$dv.cutoff, 0.9)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is dv.cutoff set to .9 when DV is TRUE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE) expect_equal(out$dv.cutoff, 0.9)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
*** caught segfault ***
address 0x110, cause 'invalid permissions'
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e)
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") 2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") 3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame()) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: 17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e)try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L
23: lapply(seq_len(cores), inner.do)
24: sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") }parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE)
26: eval(code, test_env)
27: }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: eval(code, test_env)
doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
32: tryCatch(withCallingHandlers({ eval(code, test_env) if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
}}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")
33: doWithOneRestart(return(expr), restart)
34: } else if (!new_expectations && skip_on_empty) { skip_empty() }withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) {test_code(code, parent.frame())
37: test_that("Is the first and second factor merged when DV is TRUE, merge.mod is TRUE and dv.factors is missing?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE) expect_equal(grepl("F2 =~ ", out$mod2), FALSE) })
38: eval(code, test_env) if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")
39: eval(code, test_env)
40: }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the first and second factor merged when DV is TRUE, merge.mod is TRUE and dv.factors is missing?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, withCallingHandlers({ eval(code, test_env) merge.mod = TRUE) expect_equal(grepl("F2 =~ ", out$mod2), FALSE) })
38: eval(code, test_env)
39: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
}}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) {tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }doWithOneRestart(return(expr), restart)
46: }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...) end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)54: tryCatchList(expr, classes, parentenv, handlers)
55:
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56:
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: 56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle,
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1:
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, 2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable) 4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: 5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11:
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: 19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
.Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE, dv.factors = c("F2", "F3"))
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env)22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE, new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]]) dv.factors = c("F2", "F3"))
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is merging used when DV is TRUE, merge.mod is TRUE and dv.factors is provided?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE, dv.factors = c("F2", "F3")) expect_equal(out$merge.mod, TRUE) })
38: }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is merging used when DV is TRUE, merge.mod is TRUE and dv.factors is provided?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, merge.mod = TRUE, dv.factors = c("F2", "F3")) expect_equal(out$merge.mod, TRUE)eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
} else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: 43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48:
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectationstest_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5:
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, eval(sc, parent.frame())
6: eval(sc, parent.frame()) std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") }11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) {
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.cutoff = 0.85)
} invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: 26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.cutoff = 0.85)
26: eval(code, test_env)29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]]) eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }test_that("Is dv.cutoff set to .85 taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.cutoff = 0.85) expect_equal(grepl("F2~~0.85*F1", out$mod2), FALSE)})
38: eval(code, test_env)
39: eval(code, test_env)
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
36: test_code(code, parent.frame())
37: test_that("Is dv.cutoff set to .85 taken over?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.cutoff = 0.85) expect_equal(grepl("F2~~0.85*F1", out$mod2), FALSE)})
38: eval(code, test_env)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() {tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46:
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle) skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49:
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
26: eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
27: withCallingHandlers(expr, condition = function(cnd) { if (!is.null(matched) || !matches(cnd)) { return() } if (can_entrace(cnd)) { cnd <- cnd_entrace(cnd) } matched <<- cnd if (inherits(cnd, "message") || inherits(cnd, "warning")) { cnd_muffle(cnd) } else if (inherits(cnd, "error") || inherits(cnd, "skip")) { return_from(tl, cnd) }})
28: .capture(act$val <- eval_bare(quo_get_expr(.quo), quo_get_env(.quo)), ...)
29: quasi_capture(enquo(object), label, capture_matching_condition, matches = matcher)
30: expect_condition_matching_("warning", { { object }}, regexp = regexp, class = class, ..., inherit = inherit, info = info, label = label)
31: expect_warning(gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE))
32: eval(code, test_env)
33: eval(code, test_env)
34: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
35: doTryCatch(return(expr), name, parentenv, handler)
36: tryCatchOne(expr, names, parentenv, handlers[[1L]])
37: tryCatchList(expr, classes, parentenv, handlers)
38: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
39: doWithOneRestart(return(expr), restart)
40: withOneRestart(expr, restarts[[1L]])
41: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
42: test_code(code, parent.frame())
43: test_that("Is a warning produced when standardized is switched off?", { expect_warning(gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)) })
44: eval(code, test_env)
45: eval(code, test_env)
46: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
47: doTryCatch(return(expr), name, parentenv, handler)
48: tryCatchOne(expr, names, parentenv, handlers[[1L]])
49: tryCatchList(expr, classes, parentenv, handlers)
50: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
51: doWithOneRestart(return(expr), restart)
52: withOneRestart(expr, restarts[[1L]])
53: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
54: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
55: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
56: FUN(X[[i]], ...)
57: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
58: doTryCatch(return(expr), name, parentenv, handler)
59: tryCatchOne(expr, names, parentenv, handlers[[1L]])
60: tryCatchList(expr, classes, parentenv, handlers)
61: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
62: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
63: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
64: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
65: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
66: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)
26: eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
27: withCallingHandlers(expr, condition = function(cnd) { if (!is.null(matched) || !matches(cnd)) { return() } if (can_entrace(cnd)) { cnd <- cnd_entrace(cnd) } matched <<- cnd if (inherits(cnd, "message") || inherits(cnd, "warning")) { cnd_muffle(cnd) } else if (inherits(cnd, "error") || inherits(cnd, "skip")) { return_from(tl, cnd) }})
28: .capture(act$val <- eval_bare(quo_get_expr(.quo), quo_get_env(.quo)), ...)
29: quasi_capture(enquo(object), label, capture_matching_condition, matches = matcher)
30: expect_condition_matching_("warning", { { object }}, regexp = regexp, class = class, ..., inherit = inherit, info = info, label = label)
31: expect_warning(gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE))
32: eval(code, test_env)
33: eval(code, test_env)
34: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
35: doTryCatch(return(expr), name, parentenv, handler)
36: tryCatchOne(expr, names, parentenv, handlers[[1L]])
37: tryCatchList(expr, classes, parentenv, handlers)
38: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
39: doWithOneRestart(return(expr), restart)
40: withOneRestart(expr, restarts[[1L]])
41: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
42: test_code(code, parent.frame())
43: test_that("Is a warning produced when standardized is switched off?", { expect_warning(gen_fit(mod1 = mod, x = bb1992, rep = 10, standardized = FALSE)) })
44: eval(code, test_env)
45: eval(code, test_env)
46: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
47: doTryCatch(return(expr), name, parentenv, handler)
48: tryCatchOne(expr, names, parentenv, handlers[[1L]])
49: tryCatchList(expr, classes, parentenv, handlers)
50: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
51: doWithOneRestart(return(expr), restart)
52: withOneRestart(expr, restarts[[1L]])
53: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
54: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
55: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
56: FUN(X[[i]], ...)
57: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
58: doTryCatch(return(expr), name, parentenv, handler)
59: tryCatchOne(expr, names, parentenv, handlers[[1L]])
60: tryCatchList(expr, classes, parentenv, handlers)
61: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
62: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
63: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
64: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
65: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
66: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats,
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: 8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]]) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) {17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))
23: lapply(seq_len(cores), inner.do)
})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10) if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {
26: eval(code, test_env)
27: eval(code, test_env) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29:
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) {31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env)
31: tryCatchList(expr, classes, parentenv, handlers)
new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE } else if (!new_expectations && skip_on_empty) { skip_empty() } invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {test_code(code, parent.frame())
37: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]]) expect_equal(out1$seed, out2$seed)})
38: eval(code, test_env)
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env)39: eval(code, test_env)
40: withCallingHandlers({ new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))36: test_code(code, parent.frame())
37: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed) }})}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message,
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: 48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: withRestarts(tryCatch(withCallingHandlers({source_file(path, env = env(env), desc = desc, shuffle = shuffle, eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE error_call = error_call)
50: invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) {48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, cat(conditionMessage(cnd), "\n") NULL})
56: error_call = error_call)
50: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, 55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL}) ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code, parent.frame())
37: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
38: eval(code, test_env)
39: eval(code, test_env)
40: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
45: doWithOneRestart(return(expr), restart)
46: withOneRestart(expr, restarts[[1L]])
47: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
48: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
49: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
50: FUN(X[[i]], ...)
51: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
56: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
57: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
58: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
59: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
60: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one,
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable) NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4:
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame()) 5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE) std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) {
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
} else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) }14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...) invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13:
16: doTryCatch(return(expr), name, parentenv, handler)
17: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) {
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler) call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
22: FUN(X[[i]], ...)
23:
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env)lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10) if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {
31: tryCatchList(expr, classes, parentenv, handlers)
32: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
})
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43:
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, 47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39:
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46:
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend-34.R
Saving _problems/test-recommend-56.R
Saving _problems/test-recommend-69.R
Saving _problems/test-recommend-94.R
Saving _problems/test-recommend-112.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3:
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions,
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame()) if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8:
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)doTryCatch(return(expr), name, parentenv, handler)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e)
if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers) if (is.na(w))
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: 21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15:
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])25: gen_fit(mod1 = mod, x = bb1992, rep = 10)
26: eval(code, test_env)
27:
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) eval(code, test_env) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUElapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10) invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))
26: eval(code, test_env)
27: eval(code, test_env)
}}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
} else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }}, skip = handle_skip, warning = handle_warning, message = handle_message, else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call) if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE
38: FUN(X[[i]], ...)
39: invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38:
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULLFUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47:
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
*** caught segfault ***
address 0x110, cause 'invalid permissions'
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE,
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) 8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) {18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))}) call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) 13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") }FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ")20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE) "F5"), dv.cutoff = 0.9)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), dv.cutoff = 0.9)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle,
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
error_call = error_call)
38: FUN(X[[i]], ...)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40:
42: tryCatchList(expr, classes, parentenv, handlers)
43: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45:
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call) desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, 47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samplestats_Gamma(Y = Y, x.idx = x.idx[[g]], cluster.idx = cluster.idx, fixed.x = fixed.x, conditional.x = conditional.x, meanstructure = meanstructure, slopestructure = conditional.x, gamma.n.minus.one = lavoptions$gamma.n.minus.one, unbiased = lavoptions$gamma.unbiased, Mplus.WLS = FALSE)
2: lav_samplestats_from_data(lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV)
3: lav_lavaan_step05_samplestats(slotSampleStats = slotSampleStats, lavdata = lavdata, lavoptions = lavoptions, WLS.V = WLS.V, NACOV = NACOV, sample.cov = sample.cov, sample.mean = sample.mean, sample.th = sample.th, sample.nobs = sample.nobs, ov.names = ov.names, ov.names.x = ov.names.x, lavpartable = lavpartable)
4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa")
5: eval(sc, parent.frame())
6: eval(sc, parent.frame())
7: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
13: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
14: FUN(X[[i]], ...)
15: lapply(X = S, FUN = FUN, ...)
16: doTryCatch(return(expr), name, parentenv, handler)
17: tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: tryCatchList(expr, classes, parentenv, handlers)
19: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
20: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: FUN(X[[i]], ...)
23: lapply(seq_len(cores), inner.do)
24: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
25: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
26: eval(code, test_env)
27: eval(code, test_env)
28: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
29: doTryCatch(return(expr), name, parentenv, handler)
30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: tryCatchList(expr, classes, parentenv, handlers)
32: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(expr, restarts[[1L]])
35: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
36: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
38: FUN(X[[i]], ...)
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
40: doTryCatch(return(expr), name, parentenv, handler)
41: tryCatchOne(expr, names, parentenv, handlers[[1L]])
42: tryCatchList(expr, classes, parentenv, handlers)
43: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
44: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
45: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
46: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
47: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
48: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend_dv-43.R
Saving _problems/test-recommend_dv-51.R
Saving _problems/test-recommend_dv-59.R
Saving _problems/test-recommend_dv-68.R
[ FAIL 14 | WARN 25 | SKIP 0 | PASS 55 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-flex_co.R:24:13'): Is the function warning because of low replications? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-flex_co.R:24:13
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─FCO::flex_co(...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-flex_co.R:34:13'): Is the function accepting multiple indices? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-flex_co.R:34:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::flex_co(...)
4. └─index %in% names(fits.nna[[1]])
── Error ('test-flex_co.R:47:13'): Is the function reversing quantile definition based on gof? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-flex_co.R:47:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::flex_co(...)
4. └─index %in% names(fits.nna[[1]])
── Error ('test-flex_co.R:70:13'): Is the function returning values for two models? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-flex_co.R:70:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::flex_co(...)
4. └─index %in% names(fits.nna[[1]])
── Failure ('test-gen_fit.R:99:13'): Is the result fco of gen_fit a list of matrices with two rows? ──
Expected `nrow(do.call("rbind", out$fco))` to equal 20.
Differences:
`actual` is NULL
`expected` is a double vector (20)
── Error ('test-recommend.R:29:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #1 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:29:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:51:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #3 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:51:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:62:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #4 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:62:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:86:13'): Is the result rounded properly? ───────────
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:86:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:104:13'): Are the indices properly used when override is TRUE? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:104:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend_dv.R:40:13'): Are multiple fit indices supported? ────
Error in `recommend_dv(fits = fits.dv.merge, index = c("CFI", "SRMR", "GFI"))`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend_dv.R:40:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(...)
── Error ('test-recommend_dv.R:49:13'): Is the proper dv technique used? merging? ──
Error in `recommend_dv(fits = fits.dv.merge, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.merge, )) at test-recommend_dv.R:49:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.merge, )
── Error ('test-recommend_dv.R:57:13'): Is the proper dv technique used? constraining? ──
Error in `recommend_dv(fits = fits.dv.con, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, )) at test-recommend_dv.R:57:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, )
── Error ('test-recommend_dv.R:65:13'): Is the result rounded properly? ────────
Error in `recommend_dv(fits = fits.dv.con, digits = 5)`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, digits = 5)) at test-recommend_dv.R:65:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, digits = 5)
[ FAIL 14 | WARN 25 | SKIP 0 | PASS 55 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-arm64