309b76b687a20f2ff494fc0b6cecd3fc *DESCRIPTION
d5cd9bbea61d6f6cef080334be88ed9d *LICENSE
11d83f08f004b71bdf0534cdafaf6030 *NAMESPACE
3070a527ad58abe641d0efa3c80c3f97 *NEWS.md
6c5ec42eee52f1cc028894c004fb79b9 *R/RcppExports.R
d82ed42095db5f34c4b8030ecc236908 *R/SplikitObject.R
d2943a5f60c7e8f3d10ce0e108347f1b *R/feature_selection.R
97eee2767f9efcc0dc248a83da17795b *R/general_tools.R
6a52ee6c395ae0f9e052543c30a88af0 *R/globals.R
152702dd172cb89aca47620c0a680de8 *R/plotting.R
88ea6e22b5e58c235b87673be7ae3db4 *R/splikit-package.R
70933a8d30a296b2c805be6b0ccf42f4 *R/star_solo_processing.R
2a5898979a69c191d4e97410040028d5 *R/zzz.R
48d7f4e54640b667b5c885bf8369fc95 *README.md
97b5654719b9b4712740dc1ec8be1564 *build/vignette.rds
862f0fd164e5a78e921344481e002fea *inst/doc/STARsolo_guide.Rmd
a22084159dc270945f90f6bec1747113 *inst/doc/STARsolo_guide.html
fea9f6a4d3725c215db3e826db4dad67 *inst/doc/methods.Rmd
52fc22404cc98f51da0f98dab2cc7282 *inst/doc/methods.html
21f83b7184a7d791ade8008adfd6e2e5 *inst/doc/splikit_manual.Rmd
b507d0c972d1d5ffeb949eec70b9682c *inst/doc/splikit_manual.html
ea1f9b580b75b333d53cc87db0df0a47 *inst/extdata/toy_SJ_object.RDS
0d4ef0060b357b67cc95e7e77f42ce66 *inst/extdata/toy_m1_m2_obj.rds
20b024eb5c7f1a595a6abc6300a1d170 *man/SplikitObject.Rd
1dac6cd84ebba9c704190f6354fe53b7 *man/figures/Markdown_figure.jpg
1fa26b25b046d38b7cdd3d2966415ab5 *man/figures/logo.png
7ae82da79ac553750cd2f965f9f3d892 *man/find_variable_events.Rd
6e5f8d92bc5772159b36016ae49d3dc6 *man/find_variable_genes.Rd
9571cb10b31c97901bec9ab86cf102a7 *man/get_pseudo_correlation.Rd
3fdf01c4f1e53c796969a08c55305f23 *man/get_rowVar.Rd
ccecacbb1a821fe022530533666574bc *man/get_silhouette_mean.Rd
8cb9fccbe48ef4ac820818485e37d755 *man/load_toy_M1_M2_object.Rd
b4025e014178dabd6ef77ce8895323a5 *man/load_toy_SJ_object.Rd
4d2a4e8fe2d3d25d4ae77471a5dc884b *man/make_eventdata_plus.Rd
8a5d4d3ab4470512cf91676df5d7ef38 *man/make_gene_count.Rd
7a1caea5d0d6aa761cb36c328ca12df3 *man/make_junction_ab.Rd
731fca6e036eb56672665bd259af4e5c *man/make_m1.Rd
b0f4840c42b838193c30b31e176abaf2 *man/make_m2.Rd
9e4f2ccef31f20a5e20929377889cbcb *man/make_m2_cpp.Rd
b11bb02e792d63ec63216cb0326a80ba *man/make_m2_cpp_parallel.Rd
14747f88f4ef4383885f12c504b485dc *man/make_velo_count.Rd
73667ef17d451761a9b9925991d4a7ac *man/plot_exclusive_junctions.Rd
83deb8bc3b0ef3386ad4ea96568a5e29 *man/plot_exclusive_junctions_event.Rd
609256960c1fa9df52df14d326f8a482 *man/plot_exclusive_junctions_pdf.Rd
2f61311d80512f516e1e26e2cab7056c *man/print.splikit_junction_plot.Rd
ab74e652f99f0d0ca71bcf7a3efa78dd *man/splikit-package.Rd
2669784de9dd23ca37eca11a6c67821d *man/splikit.Rd
0c1e64b2d95a319fc5043223ddf75cae *src/Makevars
0c1e64b2d95a319fc5043223ddf75cae *src/Makevars.win
73347a1ed9d44ba3059440fadcacea74 *src/RcppExports.cpp
e9720761486a7bf4484c768f034ba00d *src/average_silhouette.cpp
80203237610c43c618e77626344e7153 *src/calcDeviances.cpp
07ee647fe1388a8eb12c019c5cd52b86 *src/cpp_pseudoR2.cpp
0028f328fb6cacffea2cdf552ebff9da *src/deviance_gene.cpp
26a538def5e7be3bd7fa2d27f0de9b75 *src/hvf_gene_expression.cpp
8f27ca9f75a293e919386aa7e7e7cd84 *src/make_m2_cpp.cpp
f4f615549e274a1d8b690d3bc594182a *src/row_variance.cpp
59d3aec59a1a0f9702149b5fb1a64fb0 *tests/testthat.R
c30e794ede877d1cd399cab4b6db85f6 *tests/testthat/test-SplikitObject.R
0eff0f45018991cf701d964c499a3f77 *tests/testthat/test-general_tools.R
225e3812b897786befc574f805c96dc2 *tests/testthat/test-star_solo_processing.R
862f0fd164e5a78e921344481e002fea *vignettes/STARsolo_guide.Rmd
fea9f6a4d3725c215db3e826db4dad67 *vignettes/methods.Rmd
21f83b7184a7d791ade8008adfd6e2e5 *vignettes/splikit_manual.Rmd
