ConvertPhangornReconstructions
                        Convert phangorn reconstruction to a vector
ancRECON                Ancestral state reconstruction
corDISC                 Correlated evolution binary traits
corHMM                  Hidden Rates Model
fitCorrelationTest      Test for correlation
getFullMat              Combines several rate class index matrices
getStateMat4Dat         Produce an index matrix and legend from a
                        dataset
makeSimmap              Simulate a character history
plotMKmodel             Plot a Markov model
plotRECON               Plot ancestral state reconstructions
primates                Example datasets
rayDISC                 Evolution of categorical traits
