addVisualization	Mercator-class
barplot,Mercator-method	Mercator-class
binaryDistance	binaryDistance
BinaryMatrix	binaryMatrix
BinaryMatrix-class	binaryMatrix
CML1000	datasets
CML500	datasets
dim,BinaryMatrix-method	binaryMatrix
dim,Mercator-method	Mercator-class
downsample	downsample
fakeclin	datasets
fakedata	datasets
getClusters	Mercator-class
goodmanKruskalDistance	binaryDistance
goodmanKruskalSimilarity	binaryDistance
hammingDistance	binaryDistance
hist,BinaryMatrix-method	binaryMatrix
hist,Mercator-method	Mercator-class
jaccardDistance	binaryDistance
jaccardSimilarity	binaryDistance
lgfFeatures	datasets
Mercator	Mercator-class
Mercator-class	Mercator-class
mercator-data	datasets
pearsonDistance	binaryDistance
pearsonSimilarity	binaryDistance
plot,Mercator,missing-method	Mercator-class
print,BinaryMatrix-method	binaryMatrix
recluster	coloring
recolor	coloring
remapColors	coloring
removeDuplicateFeatures	removeDuplicateFeatures
removeDuplicates	removeDuplicateFeatures
russellRaoSimilarity	binaryDistance
russelRaoDistance	binaryDistance
scatter,Mercator-method	Mercator-class
setClusters	coloring
show,BinaryMatrix-method	binaryMatrix
sokalMichenerDistance	binaryDistance
sokalMichenerSimilarity	binaryDistance
summary,BinaryMatrix-method	binaryMatrix
summary,Mercator-method	Mercator-class
t,BinaryMatrix-method	binaryMatrix
ThreshedBinaryMatrix	threshLGF
ThreshedBinaryMatrix-class	threshLGF
threshLGF	threshLGF
validBinaryMatrix	binaryMatrix
[,BinaryMatrix,ANY,ANY,ANY-method	binaryMatrix
[,Mercator,ANY,ANY,ANY-method	Mercator-class
