R: Representation for Glycan Compositions and Structures

# Representation for Glycan Compositions and Structures

## Documentation for package ‘glyrepr’ version 0.12.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

as_glycan_composition | Convert to Glycan Composition
as_glycan_structure | Convert to Glycan Structure Vector
available_monosaccharides | Get Available Monosaacharides
available_substituents | Available Substituents
convert_to_generic | Convert Monosaccharides to Generic Type
convert_to_generic.character | Convert Monosaccharides to Generic Type
convert_to_generic.glyrepr_composition | Convert Monosaccharides to Generic Type
convert_to_generic.glyrepr_structure | Convert Monosaccharides to Generic Type
count_mono | Get the Number of Monosaccharides
count_mono.glyrepr_composition | Get the Number of Monosaccharides
count_mono.glyrepr_structure | Get the Number of Monosaccharides
fill_anomer_pos | Fill Anomer Positions
get_anomer | Get the Anomeric information
get_anomer_pos | Get Anomer Positions
get_mono_type | Get Monosaccharide Types
get_mono_type.character | Get Monosaccharide Types
get_mono_type.glyrepr_composition | Get Monosaccharide Types
get_mono_type.glyrepr_structure | Get Monosaccharide Types
get_structure_graphs | Access Individual Glycan Structures
get_structure_level | Get the Structure Resolution Levels
glycan_composition | Create a Glycan Composition
glycan_structure | Create a Glycan Structure Vector
has_linkages | Determine if a Glycan Structure has Linkages
is_glycan_composition | Create a Glycan Composition
is_glycan_structure | Create a Glycan Structure Vector
is_known_monosaccharide | Check if a Monosaccharide is Known
n_glycan_core | Example Glycan Structures
o_glycan_core_1 | Example Glycan Structures
o_glycan_core_2 | Example Glycan Structures
possible_linkages | Generate Possible Linkages
reduce_structure_level | Reduce a Glycan Structure to a Lower Resolution Level
remove_linkages | Remove All Linkages from a Glycan
remove_substituents | Remove All Substituents from a Glycan
severy | Test Predicates on Glycan Structure Vectors
simap | Map Functions Over Glycan Structure Vectors with Indices
simap_chr | Map Functions Over Glycan Structure Vectors with Indices
simap_dbl | Map Functions Over Glycan Structure Vectors with Indices
simap_int | Map Functions Over Glycan Structure Vectors with Indices
simap_lgl | Map Functions Over Glycan Structure Vectors with Indices
simap_structure | Map Functions Over Glycan Structure Vectors with Indices
simap_vec | Map Functions Over Glycan Structure Vectors with Indices
smap | Map Functions Over Glycan Structure Vectors
smap2 | Map Functions Over Two Glycan Structure Vectors
smap2_chr | Map Functions Over Two Glycan Structure Vectors
smap2_dbl | Map Functions Over Two Glycan Structure Vectors
smap2_int | Map Functions Over Two Glycan Structure Vectors
smap2_lgl | Map Functions Over Two Glycan Structure Vectors
smap2_structure | Map Functions Over Two Glycan Structure Vectors
smap2_vec | Map Functions Over Two Glycan Structure Vectors
smap_chr | Map Functions Over Glycan Structure Vectors
smap_dbl | Map Functions Over Glycan Structure Vectors
smap_int | Map Functions Over Glycan Structure Vectors
smap_lgl | Map Functions Over Glycan Structure Vectors
smap_predicates | Test Predicates on Glycan Structure Vectors
smap_structure | Map Functions Over Glycan Structure Vectors
smap_unique | Apply Function to Unique Structures Only
smap_vec | Map Functions Over Glycan Structure Vectors
snone | Test Predicates on Glycan Structure Vectors
spmap | Map Functions Over Glycan Structure Vectors and Multiple Arguments
spmap_chr | Map Functions Over Glycan Structure Vectors and Multiple Arguments
spmap_dbl | Map Functions Over Glycan Structure Vectors and Multiple Arguments
spmap_int | Map Functions Over Glycan Structure Vectors and Multiple Arguments
spmap_lgl | Map Functions Over Glycan Structure Vectors and Multiple Arguments
spmap_structure | Map Functions Over Glycan Structure Vectors and Multiple Arguments
spmap_vec | Map Functions Over Glycan Structure Vectors and Multiple Arguments
ssome | Test Predicates on Glycan Structure Vectors
structure_to_iupac | Convert Glycan Structure to IUPAC-like Sequence
valid_linkages | Check if Linkages are Valid