Common Dimensions (ComDim) Multi-Block Analysis
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Documentation for package ‘R.ComDim’ version 1.0.0
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| AddMetadata | AddMetadata |
| blockNames | blockNames |
| blockNames-method | blockNames |
| blockNames<- | blockNames<- |
| blockNames<--method | blockNames<- |
| ComDim | MultiBlock object |
| ComDim-classes | MultiBlock object |
| ComDim_Exploratory | ComDim_Exploratory - Extending matrix decomposition methods to multi-block data. |
| ComDim_OPLS | ComDim_OPLS |
| ComDim_PCA | ComDim_PCA |
| ComDim_PLS | ComDim_PLS |
| ComDim_y | ComDim_y - Extending PLS-like supervised methods to multi-block data. |
| ExpandMultiBlock | ExpandMultiBlock |
| extra | Extracellular metabolites in growth medium |
| FilterSamplesMultiBlock | FilterSamplesMultiBlock |
| gcms | GCMS data on cell differentiation |
| intra | Intracellular metabolites in growth medium |
| KEGG_table_metabolites | Metadata for the metabolites in growth medium |
| lcms | LCMS data on cell differentiation |
| lipids | Lipid profiles of cell extracts |
| MakeComDimLoadingsTable | MakeComDimLoadingsTable |
| MakeComDimScoresTable | MakeComDimScoresTable |
| metadata_lipids | Metadata for the lipid profiles of cell extracts |
| metadata_RNAseq3 | Metadata for the RNAseq data of cell extracts |
| mirnaseq | miRNAseq data on cell differentiation |
| MultiAssayExperiment2MultiBlock | MultiAssayExperiment2MultiBlock |
| MultiBlock | MultiBlock |
| MultiBlock2Matrix | MultiBlock2Matrix |
| MultiBlock2MultiAssayExperiment | MultiBlock2MultiAssayExperiment |
| NAInfRemoveMultiBlock | NAInfRemoveMultiBlock |
| ncol-method | ncol for MultiBlock |
| NormalizeMultiBlock | NormalizeMultiBlock |
| nrow-method | nrow for MultiBlock |
| OPLS_NIPALS_DNR | OPLS_NIPALS_DNR |
| PredictMultiBlock | PredictMultiBlock |
| ProcessMultiBlock | ProcessMultiBlock |
| rnaseq | RNAseq data on cell differentiation |
| RNAseq3 | RNAseq data of cell extracts |
| sampleNames | sampleNames |
| sampleNames-method | sampleNames |
| sampleNames<- | sampleNames<- |
| sampleNames<--method | sampleNames<- |
| SelectFeaturesRW | SelectFeaturesRW |
| SimulateMultiBlock | SimulateMultiBlock |
| SplitRW | SplitRW |
| SummarizedExperiment2MultiBlock | SummarizedExperiment2MultiBlock |
| variableNames | variableNames |
| variableNames-method | variableNames |
| variableNames<- | variableNames<- |
| variableNames<--method | variableNames<- |