Last updated on 2026-08-25 19:50:15 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.1 | 10.30 | 435.57 | 445.87 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.1 | 7.00 | 291.93 | 298.93 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.1 | 8.00 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.1 | 7.00 | 110.44 | 117.44 | ERROR | |
| r-devel-windows-x86_64 | 0.1.1 | 14.00 | 379.00 | 393.00 | OK | |
| r-patched-linux-x86_64 | 0.1.1 | 7.60 | 428.74 | 436.34 | OK | |
| r-release-linux-x86_64 | 0.1.1 | 9.10 | 417.14 | 426.24 | OK | |
| r-release-macos-arm64 | 0.1.1 | 3.00 | 101.00 | 104.00 | OK | |
| r-release-macos-x86_64 | 0.1.1 | 7.00 | 571.00 | 578.00 | OK | |
| r-release-windows-x86_64 | 0.1.1 | 14.00 | 351.00 | 365.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.1 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.1 | 7.00 | 328.00 | 335.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.1 | 17.00 | 546.00 | 563.00 | OK |
Version: 0.1.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘summaryByVisit.Rmd’ using rmarkdown
Quitting from summaryByVisit.Rmd:76-81 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/dplyr:::mutate_error>
Error in `dplyr::mutate()`:
ℹ In argument: `tbl = map(...)`.
Caused by error in `gtsummary::tbl_strata_nested_stack()`:
! The following error occurred while building a table:
✖ The `update` argument of `modify_header()` was deprecated in gtsummary 2.0.0
and is now defunct. ℹ Use `modify_header(...)` input instead. Dynamic dots
allow for syntax like `modify_header(!!!list(...))`.
---
Backtrace:
▆
1. └─summarySCI::summaryByVisit(...)
2. ├─base::assign(...)
3. └─gtsummary::tbl_strata_nested_stack(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summaryByVisit.Rmd' failed with diagnostics:
ℹ In argument: `tbl = map(...)`.
Caused by error in `gtsummary::tbl_strata_nested_stack()`:
! The following error occurred while building a table:
✖ The `update` argument of `modify_header()` was deprecated in gtsummary 2.0.0
and is now defunct. ℹ Use `modify_header(...)` input instead. Dynamic dots
allow for syntax like `modify_header(!!!list(...))`.
--- failed re-building ‘summaryByVisit.Rmd’
--- re-building ‘summaryLevels.Rmd’ using rmarkdown
Quitting from summaryLevels.Rmd:70-75 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/lifecycle_error_deprecated>
Error:
! The `update` argument of `modify_header()` was deprecated in gtsummary
2.0.0 and is now defunct.
ℹ Use `modify_header(...)` input instead. Dynamic dots allow for syntax like
`modify_header(!!!list(...))`.
---
Backtrace:
▆
1. └─summarySCI::summaryLevels(...)
2. ├─gtsummary::modify_table_styling(...)
3. └─gtsummary::modify_header(...)
4. └─gtsummary:::.deprecate_modify_update_and_quiet_args(...)
5. └─lifecycle::deprecate_stop(...)
6. └─lifecycle:::deprecate_stop0(msg)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summaryLevels.Rmd' failed with diagnostics:
The `update` argument of `modify_header()` was deprecated in gtsummary
2.0.0 and is now defunct.
ℹ Use `modify_header(...)` input instead. Dynamic dots allow for syntax like
`modify_header(!!!list(...))`.
--- failed re-building ‘summaryLevels.Rmd’
--- re-building ‘summaryTable.Rmd’ using rmarkdown
--- finished re-building ‘summaryTable.Rmd’
SUMMARY: processing the following files failed:
‘summaryByVisit.Rmd’ ‘summaryLevels.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc