Last updated on 2025-07-31 18:52:56 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 252.26 | 264.84 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.43 | 234.54 | 244.97 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.10 | 257.90 | 272.00 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 163.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 205.00 | 225.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 157.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 281.00 | 305.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/111s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.483, system: 0.035, elapsed: 2.234 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.910, system: 0.068, elapsed: 13.061 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.241 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.807, system: 0.198, elapsed: 5.719 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.274 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.089, system: 0.340, elapsed: 22.299 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.482, system: 0.036, elapsed: 2.619 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.932, system: 0.069, elapsed: 15.990 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.246 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.679, system: 0.160, elapsed: 4.962 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.174 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.956, system: 0.301, elapsed: 24.915 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.041, elapsed: 2.009 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.964, system: 0.111, elapsed: 11.485 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.775, system: 0.246, elapsed: 5.665 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.006, elapsed: 0.237 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.169, system: 0.248, elapsed: 1.161 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.422, system: 0.689, elapsed: 21.597 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.513, system: 0.055, elapsed: 1.958 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.075, system: 0.193, elapsed: 12.855 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.283 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.794, system: 0.180, elapsed: 5.073 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.170 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.179, system: 0.463, elapsed: 14.357 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.557, system: 0.944, elapsed: 35.522 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/103s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.505, system: 0.040, elapsed: 2.055 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.025, system: 0.079, elapsed: 11.238 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.680, system: 0.195, elapsed: 5.604 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.209 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.091, system: 0.348, elapsed: 20.185 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.057, elapsed: 2.579 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.180, system: 0.181, elapsed: 16.469 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.014, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.632, system: 0.212, elapsed: 5.268 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.010, elapsed: 0.235 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.261, system: 0.503, elapsed: 25.589 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.556, system: 0.046, elapsed: 2.012 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.853, system: 0.073, elapsed: 10.574 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.010, elapsed: 0.230 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.473, system: 0.152, elapsed: 4.434 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.175 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.049, system: 0.210, elapsed: 0.818 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.903, system: 0.532, elapsed: 19.052 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.037, elapsed: 1.728 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.990, system: 0.082, elapsed: 10.825 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.203 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.481, system: 0.167, elapsed: 3.815 seconds]
Computing values for grid cells...
... done. [user: 0.154, system: 0.002, elapsed: 0.157 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.969, system: 0.433, elapsed: 13.591 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.919, system: 0.762, elapsed: 31.028 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64