Last updated on 2025-10-13 18:50:54 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.21 | 256.80 | 270.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.79 | 242.09 | 251.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 232.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 243.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/169s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.437, system: 0.036, elapsed: 4.155 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.993, system: 0.066, elapsed: 19.716 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.014, elapsed: 0.423 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.827, system: 0.206, elapsed: 7.863 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.278 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.178, system: 0.346, elapsed: 33.731 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.433, system: 0.035, elapsed: 2.707 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.060, system: 0.078, elapsed: 18.139 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.363 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.774, system: 0.170, elapsed: 7.452 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.300 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.146, system: 0.317, elapsed: 29.989 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.498, system: 0.033, elapsed: 2.357 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.946, system: 0.062, elapsed: 21.482 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.491 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.746, system: 0.183, elapsed: 10.793 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.488 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.169, system: 0.224, elapsed: 2.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.332, system: 0.538, elapsed: 39.140 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.479, system: 0.042, elapsed: 4.328 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.068, system: 0.073, elapsed: 22.376 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.329 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.714, system: 0.170, elapsed: 6.997 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.284 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.378, system: 0.483, elapsed: 19.407 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.638, system: 0.810, elapsed: 55.072 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/145s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.515, system: 0.036, elapsed: 2.976 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.955, system: 0.048, elapsed: 16.868 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.397 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.564, system: 0.180, elapsed: 7.049 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.319 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.934, system: 0.309, elapsed: 28.766 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.482, system: 0.027, elapsed: 2.711 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.877, system: 0.071, elapsed: 16.510 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.010, elapsed: 0.341 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.624, system: 0.159, elapsed: 6.631 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.309 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.867, system: 0.306, elapsed: 27.571 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.496, system: 0.028, elapsed: 2.596 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.882, system: 0.050, elapsed: 15.230 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.357 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.546, system: 0.162, elapsed: 9.717 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.012, elapsed: 0.520 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.062, system: 0.233, elapsed: 1.658 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.960, system: 0.528, elapsed: 31.366 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.469, system: 0.027, elapsed: 3.191 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.146, system: 0.186, elapsed: 17.911 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.412 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.680, system: 0.244, elapsed: 7.061 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.007, elapsed: 0.287 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.224, system: 0.533, elapsed: 18.164 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.503, system: 1.048, elapsed: 48.179 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64