Package: FCtools
Title: Functional Connectivity Tools
Version: 2.3.1
Date: 2026-09-08
Authors@R: c(
    person("Junhong", "Yu", , "junhong.yu@ntu.edu.sg", role = "aut",
           comment = c(ORCID = "0000-0002-2563-9658")),
    person("Charly", "Billaud", , "charly.billaud@ntu.edu.sg", role = c("aut","cre"),
           comment = c(ORCID = "0009-0001-3466-9963"))
  )
Maintainer: Charly Billaud <charly.billaud@ntu.edu.sg>
Description: Analyzing and visualizing brain connectivity data, including network-based statistics (NBS) for linear and linear mixed models, both at edge level and functional network level (Yeo's 7-networks (Schaefer et al. (2017) <doi:10.1093/cercor/bhx179>)). Plots include edge-wise connectograms, chord diagrams, network connectograms, heatmaps, and 3D glass brain connectivity plots. 'FCtools' works with vectors of edges (derived from connectivity/adjacency matrices) from the 'Brainnetome' (Fan et al. (2016) <doi:10.1093/cercor/bhw157>), 'Schaefer' (100 or 200, each with 19 'ASeg' subcortices) (Schaefer et al. (2017) <doi:10.1093/cercor/bhx179>, Fischl et al. (2002) <doi:10.1016/S0896-6273(02)00569-X>), and 'Automated Anatomical Labeling' (AAL) atlases (Tzourio-Mazoyer et al. (2002) <doi:10.1006/nimg.2001.0978>).  
License: GPL-3
Encoding: UTF-8
LazyData: true
URL: https://cogbrainhealthlab.github.io/FCtools/
RoxygenNote: 7.3.3
Depends: R (>= 4.1.0)
Imports: Rfast, circlize, cowplot, doParallel, doSNOW, foreach,
        ggplot2, ggplotify, ggraph, grid, gridExtra, igraph, parallel,
        plotly, png, reshape2
NeedsCompilation: no
Packaged: 2026-09-08 00:58:08 UTC; charly.billaud
Author: Junhong Yu [aut] (ORCID: <https://orcid.org/0000-0002-2563-9658>),
  Charly Billaud [aut, cre] (ORCID:
    <https://orcid.org/0009-0001-3466-9963>)
Repository: CRAN
Date/Publication: 2026-09-15 13:10:08 UTC
