* using log directory 'd:/Rcompile/CRANpkg/local/4.4/epocakir.Rcheck' * using R version 4.4.3 (2025-02-28 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'epocakir/DESCRIPTION' ... OK * this is package 'epocakir' version '0.9.9' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'epocakir' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [4s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [2s] ERROR Running examples in 'epocakir-Ex.R' failed The error most likely occurred in: > ### Name: GFR_staging > ### Title: GFR Staging > ### Aliases: GFR_staging GFR_staging.data.frame GFR_staging.units > ### GFR_staging.numeric > > ### ** Examples > > df <- tibble::tibble( + eGFR = units::set_units(c(-1, NA, 100, 70, 50, 35, 20, 10), "mL/min/1.73m2") + ) > > GFR_staging(df, "eGFR") Error: cannot convert mL/(min*1.73m^2) into mL/min Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... [21s] ERROR Running 'testthat.R' [21s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(epocakir) > > test_check("epocakir") [ FAIL 1 | WARN 9 | SKIP 0 | PASS 598 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-ckd.R:378:3'): GFR_staging() ─────────────────────────────────── Error: cannot convert mL/(min*1.73m^2) into mL/min Backtrace: ▆ 1. ├─epocakir::GFR_staging(df, "eGFR") at test-ckd.R:378:3 2. └─epocakir:::GFR_staging.data.frame(df, "eGFR") 3. ├─epocakir::GFR_staging(.data[[rlang::as_name(rlang::enquo(GFR))]]) 4. └─epocakir:::GFR_staging.units(.data[[rlang::as_name(rlang::enquo(GFR))]]) 5. ├─epocakir::GFR_staging(as_metric(GFR = GFR, value_only = TRUE)) 6. └─epocakir::as_metric(GFR = GFR, value_only = TRUE) 7. ├─units::set_units(meas, conversion$metric_units, mode = "standard") 8. └─units:::set_units.units(meas, conversion$metric_units, mode = "standard") 9. ├─base::`units<-`(`*tmp*`, value = as_units(value, ...)) 10. └─units:::`units<-.units`(`*tmp*`, value = as_units(value, ...)) [ FAIL 1 | WARN 9 | SKIP 0 | PASS 598 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [6s] OK * checking PDF version of manual ... [19s] OK * checking HTML version of manual ... [5s] OK * DONE Status: 2 ERRORs